Tuesday, November 20, 2018

NOAH - Faster 2D Data Collection

NMR users typically run 1H, 13C, COSY, HSQC, HMBC and NOESY spectra to elucidate the structures of small molecules. Even with cryogenically cooled probes and pulsed field gradient accelerated methods, collecting 2D spectra can be quite time consuming. For concentrated samples, each 2D experiment will typically take minutes to tens of minutes to collect. Much of this time is the result of waiting for T1 relaxation in each of the experiments. Recently, Kupce and Claridge1,2 have developed a technique using standard NMR hardware where multiple 2D methods are concatenated in a single super pulse sequence employing a single relaxation delay. They have called the technique NOAH (NMR by Ordered Acquisition using 1H detection) The time saving of the NOAH technique compared to individually collected 2D spectra results from waiting a single relaxation delay for all experiments rather than a single relaxation delay for each separately acquired spectrum. The data for each spectrum is acquired in separate memory blocks which are separated after data collection allowing the data for each 2D method to be processed individually. The data can also be processed in automation. The authors have kindly made this method accessible to all Bruker users through the Bruker User Library which contains pulse sequences, parameter sets, automation scripts and detailed instructions. The left-hand panel of the figure below shows the 600 MHz HMBC, Ed-HSQC and COSY spectra obtained from the NOAH-3 BSC (HMBC, HSQC, COSY) pulse sequence for sucrose in DMSO-d6.  The right-hand panel shows separately acquired 2D data sets for comparison.
The NOAH spectra were obtained from the raw concatenated data with the automation script provided. The high quality NOAH-3 data using 2 scans, 256 increments and a 2 second relaxation delay, took only 24 minutes to acquire in comparison to the separately acquired 2D spectra obtained with similar parameters, which took a total of 59 minutes to acquire. This represents a time saving of 35 minutes or 59%. It should also be noted that the data from the NOAH-3 BSC sequence is of comparable quality to that of the individually collected spectra.

1. Eriks Kupce and Tim D. W. Claridge.  Chem. Commun. 54, 7139 (2018).
2. Eriks Kupce and Tim D. W. Claridge. Angew. Chem. Int. Ed., 56, 11779 (2017).

8 comments:

Unknown said...

Hi Glenn,
Nice post! Tim was just presenting this with to the UK Bruker Users Meeting today!
Two things:
(1) You can combine this with NUS now too. So get the data even faster.
(2) JEOL have these as well now, it's a simple plug-and-play - works really nicely.
Craig

Glenn Facey said...

Hi Craig,
Thank you for the additional information.
Glenn

Anonymous said...

Hello,
i have tried to install the NOAH experiment but i came across some difficulties. I contacted Bruker and they suggested that the first time i run it, i should do it manually. I did so by following the instrustions on the Bruker manual for an HSQC run manually. When i got to the gain command (last step) i got the following message:
shape wuASAP.wv: file not found
Any suggestions as to how to solve this?
We have a Bruker Avance III, 500 MHz
Thank you in advance for your help
Kind regards

Glenn Facey said...

Anonymous,
The shaped pulses can be created with "wavemaker" using the command "wvm -a". Have you installed "wavemaker"? It is available in the Bruker user library.

Glenn

Jennifer Yan said...

Hi Glenn,

You were mentioned there is detailed instruction on how to set up the NOAH experiments, would you mind share one copy to me or guide me where to find it. I have installed NOAH on my bruker instrument, but totally lost on how to set it up since quite lot error message showed up after rpar. I think I may did some thing incorrectly.

Many thanks in advance for your guidance.

Glenn Facey said...

Hi Jennifer,
Were your errors associated with shaped pulses? The shaped pulses can be created with "wavemaker" using the command "wvm -a". Have you installed "wavemaker"? It is available in the Bruker user library.

Glenn

Ricardo M Borges said...

Hi Glenn,
thank you for this; and the others. They helped a lot for years now.

So, I wonder if you could suggest to me someone who could convert those NOAH supersequences into Varian coding. We have Varian in our Department and we could use those to shorten the lines.

Thanks again

Glenn Facey said...

Ricardo,
I suggest that you contact the users on Agilent's Spinsights forum https://spinsights.chem.agilent.com/login.jspa?referer=%252Fthread%252F3800

Glenn