HMQC and HSQC NMR data are commonly used to correlate the chemical shifts of protons and 13C (or 15N) across one chemical bond via the J coupling interaction. The data are 1H detected, with the 1H chemical shift in the horizontal F2 domain and the 13C (or 15N) chemical shift in the vertical F1 domain. In the case of 1H and 13C, the technique depends on protons bonded to 13C. 1H–12C spin pairs provide no coupling information and are suppressed by the method. If one is to observe the 1H signal of a 1H-13C spin pair, one expects to observe a doublet with splitting 1JH-C (i.e. the 13C satellites). Likewise, if one is to observe the 13C signal of a 1H-13C spin pair, one expects to observe a doublet with the same splitting. 2D HSQC spectra are normally presented with both 1H and 13C decoupling yielding a simplified 1H-13C chemical shift correlation map over one chemical bond. The figure below shows one of the most commonly used gradient HSQC pulse sequences. The 1H and 13C decoupling elements of the sequence are highlighted in yellow and pink, respectively.
During the evolution time, t1, the 13C chemical shift and 1H-13C coupling evolve. The 1H 180° pulse (color coded in yellow) in the center of the evolution time refocuses the coupling and as a result decouples protons in the F1 (13C) domain of the spectrum. 13C is broadband decoupled from the F2 (1H) domain by applying a GARP pulse train (color coded in pink) at the 13C frequency during the collection of the FID. One can turn each of these elements “on” or “off” for data collection. The figure below shows the 1H-13C gradient HSQC spectrum of benzene with all possible combinations of 1H and/or 13C decoupling.
In the top left panel both 1H and 13C decoupling are turned “on” and one observes a singlet in both the F2 (1H) and F1 (13C) domains. In the top right panel, the 1H decoupling element is “on” while the 13C decoupling element is “off”. The result is a 1H-13C doublet in the F2 (1H) domain and a singlet in the F1 (13C) domain. In the bottom left panel, the 1H decoupling element is “off” while the 13C decoupling element is “on”. The result is a 13C-1H doublet in the F1 (13C) domain and a singlet in the F2 (1H) domain. In the bottom right panel, both the 1H and 13C decoupling elements are “off”. The result is a 1H-13C doublet in both the F2 (1H) and F1 (13C) domains.
Showing posts with label HMQC. Show all posts
Showing posts with label HMQC. Show all posts
Wednesday, May 6, 2015
Monday, October 22, 2012
Isotope Effects and the 19F - 13C HMQC Spectrum of Trifluoroacetic Acid
The 19F - 13C HMQC spectrum of trifluoroacetic acid is shown in the figure below.
The data were collected with a delay appropriate for a 19F - 13C J coupling constant between the 1JF-C coupling constant of 284 Hz and the 2JF-C coupling constant of 44 Hz. The top and side traces are the one-pulse 19F and 13C spectra, respectively. Why are the HMQC responses not at the same 19F chemical shift and why aren't they correlated to the peak in the 19F spectrum? In order to answer these questions one must take into consideration the 19F - 12, 13C isotope effects. The chemical shift of the fluorine depends on whether it is bound to a 12C or a 13C. The effect is largest across one bond and gets smaller over multiple bonds. The 19F NMR spectrum for trifluoroacetic acid is shown in the figure below with and without 13C broadband decoupling in the upper and lower traces, respectively.
Approximately 98% of the trifluoroacetic acid is the 12CF3-12COOH isotopomer, giving rise to a large singlet plotted off-scale in the figure. Approximately 1% of the signal is from the 13CF3-12COOH isotoponer giving rise to a doublet with 1JF-C = 284 Hz and approximately 1% of the signal is from the 12CF3-13COOH isotoponer giving rise to a doublet with 2JF-C = 44 Hz. All of these signals are clearly present in the lower trace of the figure. When 13C broadband decoupling is applied, the doublets collapse into singlets. The singlets from each of the isotopomers are resolved in the top trace. The one-bond 19F - 12, 13C isotope effect is 0.13 ppm and the two-bond effect is 0.02 ppm. The figure below shows the same HMQC data with the spectrum from the top trace used as a projection.
One can see that the HMQC responses are correlated to their respective isotopomers. These effects are also present in 1H - 13C HMQC spectra, but the 1H - 12, 13C isotope effect is much smaller than the 19F - 12, 13C isotope effect.
Friday, June 11, 2010
19F - 13C HMQC
If one has an NMR spectrometer with hardware capable of synthesizing and amplifying the frequency of 19F from the 1H channel and a broadband NMR probe whose 1H channel can tune down to 19F, then one is able to do 19F - 13C HMQC experiments. The figure below shows an example of a 19F - 13C HMQC spectrum collected on a Bruker AVANCE 500 NMR spectrometer using a 5 mm broadband probe. The fluorine spectrum is plotted on the top and the 13C[19F] spectrum is plotted on the side. The panel on the left shows the spectrum optimized for one-bond coupling, while that on the right shows the spectrum optimized for two-bond coupling. Note that the protonated carbons are doublets as proton decoupling is not possible in this configuration. The large signal, off scale in the 13C[19F] spectrum is due to the solvent (benzene-d6).
Friday, July 10, 2009
31P - 13C HMQC
When most people think about HMQC or HSQC spectra they think about protons and 13C or protons and 15N. Although these are by far the most common spins to probe, the HMQC technique can be applied to other spin pairs as well. In earlier posts to this BLOG, this was demonstrated for protons and 11B and 31P and 109Ag. This post shows an application of the technique to 31P and 13C. Measurements made between spin pairs, where one of the spins is not a proton, require a triple resonance probe and the appropriate filters.
The figure below shows 31P detected 31P - 13C HMQC data for dimethyl methylphosphonate with 13C decoupling during the acquisition and 1H decoupling during the entire sequence. The spectra on the top and left-hand sides of the plots are separately run one dimensional 31P and 13C spectra, respectively, both with proton decoupling. The methyl carbon of dimethyl methylphosphonate has 1JCP = 142 Hz whereas the methoxy carbons have 2JCP = 6 Hz. Two HMQC spectra were run. The one on the left was optimized for 142 Hz and the one on the right was optimized for 6 Hz. Each spectrum shows a correlation according to its coupling constant. The data were collected on a 500 MHz instrument with the appropriate bandpass filters on each channel.

Friday, January 23, 2009
Weak One-bond or Multiple Bond Correlations in 1H / 13C HMQC / HSQC Spectra
Many people are quite surprised to see either unusually weak one-bond correlations or weak multiple bond correlations in their 1H / 13C HMQC / HSQC spectra. These people must be reminded that there is nothing "magic" about these experiments - the responses are based solely on an assigned delay proportional a reciprocal coupling constant. The large scale success of the 1H / 13C HMQC / HSQC techniques can be attributed to the fact that most one-bond 1H - 13C coupling constants are very similar ( ~ 145 Hz). The pulse sequences are therefore run with a delay based on a 145 Hz coupling constant. When one-bond coupling constants are significantly different than 145 Hz then the correlation will be either very weak or absent in the spectrum. Also, if multiple bond couplings are unusually large then those multiple bond correlations may be present in the spectrum. The figure below is an example. In the 500 MHz HMQC spectrum of an alkyne (optimized for 145 Hz coupling), one can see an unusually small one-bond correlation between the terminal alkyne proton and its attached carbon. There is also a weak two-bond correlation between the terminal alkyne proton and the other alkyne carbon.
Wednesday, January 14, 2009
HMQC vs HSQC
Proton detected Heteronuclear Multiple Quantum Coherence (HMQC) and Heteronuclear Single Quantum Coherence (HSQC) are both NMR techniques used to correlate the chemical shift of the protons in a sample to a heteronucleus such as 13C or 15N via the J coupling interaction between the nuclei. Since both techniques essentially provide the same information - a correlation map between the coupled spins - students sometimes ask which of these two methods is better and which should they use routinely. The difference between the two techniques is that during the evolution time of an HMQC both proton and X magnetization (eg: X = 13C ) are allowed to evolve whereas in an HSQC only X magnetization is allowed to evolve. This means that an HMQC is affected by homonuclear proton J coupling during the evolution period while an HSQC is not affected as there is no proton magnetization during the evolution time. The homonuclear proton J coupling manifests itself as broadening in the X dimension. The top panel of the figure below shows the 7.05 T 1H /13C HMQC and HSQC spectra of menthol with an expansion of one of the resonances highlighted in yellow. One can see that the expanded cross peak of the HMQC is broader in the 13C dimension than that of the HSQC. The bottom panel of the figure shows the corresponding 13C projection spectra. One can see that the resolution is better in the projection of the HSQC compared to the HMQC.
One might conclude that, due to the higher 13C resolution, it is always better to run an HSQC rather than an HMQC. This is definitely the case if all of the pulses are calibrated well, however since there are many more pulses in an HSQC compared to an HMQC, it is more susceptible to losses in signal-to-noise-ratio due to poor probe tuning or poor pulse calibration. My advice to students is that, if high 13C resolution is required, then make sure the pulses are calibrated well on a well tuned and matched probe and run an HSQC. If high 13C resolution is not critical then run an HMQC.
One might conclude that, due to the higher 13C resolution, it is always better to run an HSQC rather than an HMQC. This is definitely the case if all of the pulses are calibrated well, however since there are many more pulses in an HSQC compared to an HMQC, it is more susceptible to losses in signal-to-noise-ratio due to poor probe tuning or poor pulse calibration. My advice to students is that, if high 13C resolution is required, then make sure the pulses are calibrated well on a well tuned and matched probe and run an HSQC. If high 13C resolution is not critical then run an HMQC.
Tuesday, April 29, 2008
1H - 11B HMQC
HMQC and HSQC experiments are very commonly applied to 1H - 13C and 1H - 15N. These techniques can also be applied to other isotopes. The figure below shows the 1H - 11B HMQC spectrum or ortho-carborane. The top and side traces are separately acquired 1H [11B] and 11B [1H] spectra, respectively. These data, combined with the 11B COSY data, allow the complete assignment of the 1H [11B] spectrum. 
Thank you to Dominique Duguay for providing the sample of ortho-carborane.

Thank you to Dominique Duguay for providing the sample of ortho-carborane.
Wednesday, December 19, 2007
31P - 109Ag HMQC
Silver has two spin I = 1/2 isotopes (109Ag and 107Ag) with natural abundances of 48.18% and 51.82%, respectively. Although 109Ag has a lower natural abundance, it is the preferred isotope to observe as its gyromagnetic ratio is slightly higher than that of 107Ag. Direct observation of 109Ag is problematic in that the Larmor frequency is low, the NOE's to protons are negative and most importantly, the T1's are very long (minutes to hours). In some silver phosphine complexes with 109Ag - 31P coupling, the problems of observing silver directly can be circumvented by using indirect detection via a 31P detected 31P - 109Ag HMQC. The advantages of using this approach are that the directly observed 31P frequency is 8.7 times higher than that of 109Ag and the relaxation delay in the experiment depends on the 31P T1's which tend to be orders of magnitude shorter than those of 109Ag.
Below is an example of a 31P detected 31P - 109Ag HMQC for a silver phosphine complex. These data were acquired without 109Ag decoupling. In the 31P trace on the top of the spectrum one can see a single 31P resonance with coupling to both 109Ag and 107Ag. The 109Ag is indirectly observed in the F1 domain. 

Monday, November 26, 2007
HMQC Responses in HMBC Data
Despite the built in low pass J filters written into the HMBC pulse sequences, the much larger one-bond 1H - 13C coupling responses are not fully suppressed. These one-bond HMQC responses show up as a pair of responses in the acquisition domain separated by the one-bond 1H - 13C coupling. The responses are doubled since 13C decoupling is not typically used in HMBC sequences. An example of these artifacts is shown below.

Friday, October 26, 2007
Why Are Some of My HMQC Correlations Doubled?
HMQC and HSQC signals are 1H detected with 13C decoupling. The sequences essentially throw away all of the signals for protons attached to 12C and retain all of those for protons attached to 13C. The coupling between 1H and 13C is used to establish a correlation but while the 1H signal is being detected, the 13C is decoupled. Occasionally you may find that some of your HMQC/HSQC correlations appear to be doubled or have a much lower than expected signal-to-noise ratio. Often this is due to poor 13C decoupling and is a problem for correlations at the extremes of the 13C chemical shift scale. At moderate magnetic field strengths, 13C "garp" decoupling is efficient over about 150 ppm or so. If the correlations are near the limits of the center of the 13C axis plus or minus (150 ppm/2), then you will find a loss in signal-to-noise ratio and perhaps some signal doubling due to partial 13C decoupling. Below is an example of the partial HMQC spectrum of 3-heptanone. In the left panel the 13C offset was set near the 13C resonances. In the right-hand panel the 13C offset was set at 110 ppm and the terminal methyl signal is poorly decoupled.


If you encounter this problem, center the 13C offset closer to the correlation which is poorly decoupled.
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